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RaleighNorth Carolina(NC) Vann, James R. personal infomation and areas of practice

North Carolina Raleigh Vann & Sheridan, LLP attorney Vann, James R.
  • Lawyer name:Vann, James R.
  • Address:1720 Hillsborough Street Suite 200Raleigh,NC
  • Phone:(919) 510-8585
  • Fax:(919) 510-8570
  • PostalCode:27605
  • WebSite:http://pview.findlaw.com/view/
  • Areas of Practice:State, Local And Municipal Law

North Carolina RaleighVann & Sheridan, LLP attorney Vann, James R. is a Very good lawyer practice area in State, Local And Municipal Law,Vann & Sheridan, LLP

if you have any problem in State, Local And Municipal Law,please email to Vann & Sheridan, LLP or call (919) 510-8585 or Go to our company directly(addr:1720 Hillsborough Street Suite 200Raleigh,NC) ,we will provide free legal advice for you.

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    Raleigh North Carolina lawyer Vann, James R.

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    The dideoxy chain termination method was developed in 1977 by Fred Sanger at the MRC Laboratory of Molecular Biology. It is based on two facts about DNA synthesis: 1. When a single stranded DNA template is placed together with the 4 deoxynucleotide triphosphates(dNTP's) and a short primer that hybridizes to the beginning of the DNA template, DNA polymerase will direct the synthesis of a complementary strand (complementary to the DNA strand that is to be sequenced). 2. If di deoxynucleotide triphosphates (di dNTP's) are included, DNA strand elongation will terminate when a didNTP is incorporated. This is because di deoxynucleotides lack a 3' hydroxyl group which is needed to form a bond to an adjacent nucleotide.. . In the Sanger method, four reaction tubes are set up:. . The A, T, G, C tubes each contain:. . 1. The DNA template to be sequenced.. 2. A primer sequence which is complementary to the beginning of the template to be sequenced. (Therefore some information about the sequence has to be known in order to use this protocol). 3. DNA polymerase. (students should understand DNA replication and the function of DNA polymerase). 4. All four dNTP's (dATP, dTTP, dGTP, dCTP). 5. One radioactively labeled dNTP, usually 32P dATP. This is needed to expose X-ray film and results in an autoradiogram of a polyacrylamide gel.. 6. One di-deoxynucleotide triphosphate per tube:. A reaction tube: di dATP. T reaction tube: di dTTP. G reaction tube: di dGTP. C reaction tube: di dCTP. . The ratio of the di deoxynucleotide to the deoxynucleotide in each tube is one to one hundred. So that once for every 100 nucleotides added to the nucleotide in question in the template, a di deoxy form of the nucleotide is added. For example, in tube A, each time a thymine nucleotide is encountered in the sequencing reaction, a deoxyadenosine is added for 99 out of 100 times. One out of 100 times a di deoxyadenosine is added. At that point, the synthesis of the strand will terminate. The reaction in the tube will result in collections of DNA strands of differing lengths which reflect the position of the thymine nucleotide in the template strand in question. When the reactions are complete, formamide is added to denature the DNA template from the newly synthesized strands. Each reaction is loaded into a separate lane of a polyacrylamide gel. The gel is fine enough to resolve DNA fragments that differ by a single nucleotide. After electrophoresis, the gel is exposed to X-ray film and an autoradiogram is made. The bands correspond to the lengths of fragments in each reaction tube. The sequence is read from the bottom of the gel to the top. The DNA strand that was sequenced is complementary to the sequence read on the gel. (Reference: Micklos and Freyer. DNA SCIENCE. Cold Spring Harbor Laboratory Press. 1990.). . Example:. "A" Reaction. DNA:ATTGCTACGTAAGGCTAGTACATGCCT. di dATGTACGGA*(primer)( 9). di dATCATGTACGGA(12). di dATTCCGATCATGTACGGA(18). di dATGCATTCCGATCATGTACGGA(22). di dACGATGCATTCCGATCATGTACGGA(25). di dAACGATGCATTCCGATCATGTACGGA(26). . (Notice that the numbers to the right include the primer. The sizes of the fragments correspond to the location of the nucleotide which is complementary to the adenine nucleotide.). . "T" Reaction. DNA: ATTGCTACGTAAGGCTAGTACATGCCT. di dTACGGA (6). di dTGTACGGA (8). di dTCATGTACGGA (11). di dTCCGATCATGTACGGA (16). di dTTCCGATCATGTACGGA (17). di dTGCATTCCGATCATGTACGGA (21). di dTAACGATGCATTCCGATCATGTACGGA (27). . "C" Reaction. DNA: ATTGCTACGTAAGGCTAGTACATGCCT. di dCATGTACGGA (10). di dCGATCATGTACGGA (14). di dCCGATCATGTACGGA (15). di dCATTCCGATCATGTACGGA (19). di dCGATGCATTCCGATCATGTACGGA (24). . "G" Reaction. DNA: ATTGCTACGTAAGGCTAGTACATGCCT. di dGTACGGA (7). di dGATCATGTACGGA (13). di dGCATTCCGATCATGTACGGA(20). di dGATGCATTCCGATCATGTACGGA (23). . Note that all the fragment sizes are different because each one corresponds to a different nucleotide location on the DNA to be sequenced. When all the fragment sizes are listed in order, the numbers should be sequential from 6 -- 27 (the size of the DNA)

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